Parental gene:

ATP6V1E1, ENSPPYG00000011560

Aliases:None
Description:ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 [Source:HGNC Symbol;Acc:857]
Organism:Orangutan (Pongo abelii)
Coordinates:22:14224915..14261538(-)


>ENSPPYG00000011560
ATGGCTCTCAGCGATGCTGACGTGCAAAAGCAGATAAAGCATATGATGGCTTTCATTGAACAAGAAGCCAATGAGAAAGC
AGAAGAAATAGATGCAAAGGCAGAAGAAGAGTTCAACATAGAGAAAGGTCGGCTTGTGCAAACCCAAAGACTAAAGATTA
TGGAATATTATGAGAAGAAAGAGAAACAGATTGAGCAGCAGAAGAAAATTCAGATGTCCAATTTGATGAATCAAGCGAGA
CTCAAAGTCCTCAGAGCGAGAGATGACCTTATCACAGACCTACTAAATGAAGCAAAACAGAGACTCAGCAAGGTGGTAAA
AGATACAACCAGGTACCAAGTACTGCTGGATGGACTGGTTCTCCAGGCTGCGGTGCAGAAGGCAATCCCTATGTACAAAA
TTGCCACCAAAAATGATGTTGATGTCCAAATTGACCAGGAGTCCTACCTGCCTGAAGACATAGCTGGTGGAGTTGAGATC
TATAATGGGGATCGTAAAATAAAGGTTTCCAACACCCTGGAAAGCCGGCTGGATCTCATAGCCCAGCAGATGATGCCAGA
AGTCCGGGGAGCCTTGTTTGGTGCAAATGCCAACAGGAAGTTTTTGGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 43 .13 RPM
SRP007412_cerebellum 37 .45 RPM
SRP007412_heart 12 .52 RPM
SRP007412_kidney 25 .62 RPM
SRP007412_liver 7 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017489 ortholog_one2one 2 retrogenes
Bos taurus ENSBTAG00000014238 ortholog_one2one 1 retrogene
Canis familiaris ENSCAFG00000016151 ortholog_one2many 7 retrogenes
Callithrix jacchus ENSCJAG00000017277 possible_ortholog 1 retrogene
Cavia porcellus ENSCPOG00000024559 ortholog_one2one 3 retrogenes
Equus caballus ENSECAG00000016487 ortholog_one2one 2 retrogenes
Echinops telfairi ENSETEG00000019283 ortholog_one2one 2 retrogenes
Felis catus ENSFCAG00000008081 ortholog_one2one 4 retrogenes
Homo sapiens ENSG00000131100 ortholog_one2one 3 retrogenes
Gorilla gorilla ENSGGOG00000015027 ortholog_one2one 2 retrogenes
Loxodonta africana ENSLAFG00000003802 ortholog_one2one 4 retrogenes
Microcebus murinus ENSMICG00000010643 ortholog_one2one 6 retrogenes
Myotis lucifugus ENSMLUG00000014876 ortholog_one2many 2 retrogenes
Macaca mulatta ENSMMUG00000021477 ortholog_one2one 4 retrogenes
Monodelphis domestica ENSMODG00000018452 ortholog_many2many 4 retrogenes
Mustela putorius furo ENSMPUG00000018109 ortholog_one2many 2 retrogenes
Mus musculus ENSMUSG00000019210 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000007839 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000013886 ortholog_one2one 5 retrogenes
Procavia capensis ENSPCAG00000016094 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000011905 ortholog_one2many 1 retrogene
Sarcophilus harrisii ENSSHAG00000008300 ortholog_one2many 2 retrogenes
Sus scrofa ENSSSCG00000000767 ortholog_one2one 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000022031 ortholog_one2one 3 retrogenes
Tarsius syrichta ENSTSYG00000010679 ortholog_one2one 5 retrogenes
Tursiops truncatus ENSTTRG00000015931 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_189 79.39 64.53
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSPPYG00000011560 retrocopies