Parental gene: | H2afz, ENSMUSG00000037894 |
| Aliases: | H2afz, H2A.Z, H2a.z-1 |
| Description: | H2A histone family, member Z [Source:MGI Symbol;Acc:MGI:1888388] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:137864486..137866922(+) |
>ENSMUSG00000037894
ATGGCTGGCGGTAAGGCTGGAAAGGACTCCGGAAAGGCCAAGACAAAGGCGGTTTCCCGCTCGCAGCGAGCCGGCTTGCA
GTTCCCTGTGGGCCGTATTCATCGACACCTGAAATCTAGGACAACCAGCCACGGACGTGTGGGCGCGACCGCCGCTGTGT
ACAGCGCAGCCATCCTGGAGTACCTCACCGCAGAGGTACTTGAGTTGGCAGGAAATGCGTCAAAAGACTTAAAGGTAAAG
CGTATCACCCCTCGTCACTTGCAGCTTGCTATACGTGGAGATGAAGAATTGGATTCTCTGATCAAAGCTACCATTGCTGG
TGGTGGTGTCATCCCACACATCCACAAATCGCTGATCGGGAAGAAAGGACAACAGAAGACTGTTTAA
ATGGCTGGCGGTAAGGCTGGAAAGGACTCCGGAAAGGCCAAGACAAAGGCGGTTTCCCGCTCGCAGCGAGCCGGCTTGCA
GTTCCCTGTGGGCCGTATTCATCGACACCTGAAATCTAGGACAACCAGCCACGGACGTGTGGGCGCGACCGCCGCTGTGT
ACAGCGCAGCCATCCTGGAGTACCTCACCGCAGAGGTACTTGAGTTGGCAGGAAATGCGTCAAAAGACTTAAAGGTAAAG
CGTATCACCCCTCGTCACTTGCAGCTTGCTATACGTGGAGATGAAGAATTGGATTCTCTGATCAAAGCTACCATTGCTGG
TGGTGGTGTCATCCCACACATCCACAAATCGCTGATCGGGAAGAAAGGACAACAGAAGACTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 23 .71 RPM |
| SRP007412_cerebellum | 27 .96 RPM |
| SRP007412_heart | 17 .09 RPM |
| SRP007412_kidney | 21 .10 RPM |
| SRP007412_liver | 15 .54 RPM |
| SRP007412_testis | 73 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000959 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010615 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015235 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006613 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000164032 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027801 | ortholog_one2many | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000028460 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000013699 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002469 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000006834 | ortholog_one2one | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000020686 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000009519 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000041126 | within_species_paralog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013662 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000001888 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003419 | ortholog_one2one | 8 retrogenes | |
| Ochotona princeps | ENSOPRG00000012582 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014957 | ortholog_one2one | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000016312 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010306 | ortholog_one2many | 9 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000023194 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000478 | ortholog_one2many | 15 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009462 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_953 | 93.02 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2397 | 92.78 | 75.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2780 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_2976 | 87.20 | 96.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_3039 | 70.19 | 79.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_3585 | 75.82 | 71.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000037894 retrocopies