RetrogeneDB ID: | retro_meug_1457 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold411748:3778..4090(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000002626 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFZ | ||
Ensembl ID: | ENSMEUG00000013699 | ||
Aliases: | None | ||
Description: | H2A histone family, member Z [Source:HGNC Symbol;Acc:4741] |
Percent Identity: | 83.65 % |
Parental protein coverage: | 97.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GGKAGKDSGKTKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN |
G..AGKDS.K.KTK.VSRSQRAG.QF.VG.IH.HLK.RTTSHG.VGATA..YSAAILEYLTAEVLELAGN | |
Retrocopy | GRRAGKDSRKAKTKVVSRSQRAGWQFAVGSIHGHLKLRTTSHGQVGATATGYSAAILEYLTAEVLELAGN |
Parental | ASKDLKVKRITPRHLQLAIRGDEELDSLIKATIA |
ASKDLKVKRITP.H.QLAI.GDEELD.LIKATIA | |
Retrocopy | ASKDLKVKRITPHH*QLAIPGDEELD*LIKATIA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |