Parental gene:

H2afz, ENSRNOG00000010306

Aliases:None
Description:Histone H2A.Z [Source:UniProtKB/Swiss-Prot;Acc:P0C0S7]
Organism:Rat (Rattus norvegicus)
Coordinates:2:261653913..261655196(+)


>ENSRNOG00000010306
GCTGGCGGTAAGGCTGGAAAGGACTCCGGAAAGGCCAAGACAAAGGCGGTTTCCCGCTCCCAGCGAGCGGGCTTGCAGTT
CCCTGTGGGCCGTATTCATCGACACCTGAAATCTAGGACAACAAGCCACGGACGTGTGGGCGCGACCGCAGCTGTGTACA
GCGCAGCCATCCTGGAGTACCTCACCGCAGAGGTACTTGAGTTGGCAGGAAATGCATCAAAAGACTTGAAGGTAAAGCGT
ATTACCCCTCGTCACTTGCAACTTGCTATCCGCGGAGATGAAGAGTTGGACTCTCTGATCAAGGCTACGATTGCTGGTGG
TGGTGTCATCCCACACATCCACAAATCACTGATTGGGAAGAAAGGACAACAGAAGACTGTCTAA

Library Parental gene expression (RPM)
SRP017611_liver 17 .21 RPM
SRP017611_kidney 31 .89 RPM
SRP017611_brain 33 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000959 ortholog_one2many 1 retrogene
retro_amel_1183,
Canis familiaris ENSCAFG00000010615 ortholog_many2many 2 retrogenes
retro_cfam_1000, retro_cfam_101,
Callithrix jacchus ENSCJAG00000015235 ortholog_many2many 1 retrogene
retro_cjac_91,
Echinops telfairi ENSETEG00000006613 ortholog_many2many 2 retrogenes
retro_etel_137, retro_etel_54,
Homo sapiens ENSG00000164032 ortholog_one2many 6 retrogenes
retro_hsap_1292, retro_hsap_2534, retro_hsap_2581, retro_hsap_4073, retro_hsap_4113, retro_hsap_598,
Gorilla gorilla ENSGGOG00000027801 ortholog_many2many 6 retrogenes
retro_ggor_1014, retro_ggor_137, retro_ggor_1616, retro_ggor_183, retro_ggor_2760, retro_ggor_720,
Loxodonta africana ENSLAFG00000028460 ortholog_one2many 2 retrogenes
retro_lafr_1255, retro_lafr_269,
Macropus eugenii ENSMEUG00000013699 ortholog_one2many 1 retrogene
retro_meug_1457,
Microcebus murinus ENSMICG00000002469 ortholog_one2many 3 retrogenes
retro_mmur_1056, retro_mmur_1159, retro_mmur_634,
Macaca mulatta ENSMMUG00000006834 ortholog_one2many 7 retrogenes
retro_mmul_1049, retro_mmul_1320, retro_mmul_1593, retro_mmul_2368, retro_mmul_2448, retro_mmul_2465, retro_mmul_645,
Monodelphis domestica ENSMODG00000020686 ortholog_one2many 2 retrogenes
retro_mdom_1506, retro_mdom_977,
Mustela putorius furo ENSMPUG00000009519 ortholog_one2many 2 retrogenes
retro_mputfur_1343, retro_mputfur_1529,
Mus musculus ENSMUSG00000037894 ortholog_one2many 6 retrogenes
retro_mmus_2397, retro_mmus_2780, retro_mmus_2976, retro_mmus_3039, retro_mmus_3585, retro_mmus_953,
Nomascus leucogenys ENSNLEG00000013662 ortholog_one2many 3 retrogenes
retro_nleu_2505, retro_nleu_2737, retro_nleu_2864,
Oryctolagus cuniculus ENSOCUG00000001888 ortholog_one2many 2 retrogenes
retro_ocun_513, retro_ocun_728,
Otolemur garnettii ENSOGAG00000003419 ortholog_one2many 8 retrogenes
retro_ogar_2276, retro_ogar_2377, retro_ogar_2722, retro_ogar_3255, retro_ogar_3396, retro_ogar_755, retro_ogar_866, retro_ogar_885,
Ochotona princeps ENSOPRG00000012582 ortholog_one2many 1 retrogene
retro_opri_404,
Pongo abelii ENSPPYG00000014957 ortholog_one2many 7 retrogenes
retro_pabe_1070, retro_pabe_1901, retro_pabe_2374, retro_pabe_3343, retro_pabe_3367, retro_pabe_592, retro_pabe_668,
Pan troglodytes ENSPTRG00000016312 ortholog_one2many 7 retrogenes
retro_ptro_1477, retro_ptro_1508, retro_ptro_2760, retro_ptro_2792, retro_ptro_441, retro_ptro_614, retro_ptro_884,
Rattus norvegicus ENSRNOG00000007026 within_species_paralog 5 retrogenes
retro_rnor_1410, retro_rnor_1815, retro_rnor_1935, retro_rnor_2102, retro_rnor_2310,
Ictidomys tridecemlineatus ENSSTOG00000023194 ortholog_one2many 1 retrogene
retro_itri_1524,
Tupaia belangeri ENSTBEG00000000478 ortholog_many2many 15 retrogenes
retro_tbel_1289, retro_tbel_1290, retro_tbel_1320, retro_tbel_1925, retro_tbel_1959, retro_tbel_1972, retro_tbel_2304, retro_tbel_2526, retro_tbel_2685, retro_tbel_3575, retro_tbel_4077, retro_tbel_4308, retro_tbel_4369, retro_tbel_4451, retro_tbel_819,
Tarsius syrichta ENSTSYG00000009462 ortholog_many2many 2 retrogenes
retro_tsyr_1715, retro_tsyr_971,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_788 63.28 99.21
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_1136 84.42 59.84
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_rnor_1202 99.22 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_rnor_1605 76.92 61.42
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_rnor_1933 71.62 58.27
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_rnor_2155 83.81 81.89
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_rnor_2413 90.55 100.00
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_rnor_2494 90.55 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_rnor_2908 58.82 79.53
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000010306 retrocopies