RetrogeneDB ID: | retro_nleu_2864 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397455.1:2001612..2001999(-) | ||
Located in intron of: | ENSNLEG00000007978 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFZ | ||
Ensembl ID: | ENSNLEG00000013662 | ||
Aliases: | None | ||
Description: | Histone H2A [Source:UniProtKB/TrEMBL;Acc:G1RTH7] |
Percent Identity: | 84.73 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAGGKAGKDSGKAKTKAV-SRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLEL |
MAG.KAGKDSGKAKTKAV.S.S.RA.LQFPVG.IH.HLKSRTT.HG.VGATAAVYSAAILEYL.AE.LEL | |
Retrocopy | MAGSKAGKDSGKAKTKAV>SHSLRANLQFPVGCIHQHLKSRTTGHGHVGATAAVYSAAILEYLAAEGLEL |
Parental | AGNAS-KDLKVK-RITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV |
AGN.S.K.LK.K..ITPRHLQLAI..DEELDSLIKATIAGGGVIPHIHKSLIGKKGQQK.V | |
Retrocopy | AGNGS<KILKGKVYITPRHLQLAICADEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKIV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |