RetrogeneDB ID: | retro_ogar_3255 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873757.1:442697..443080(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFZ | ||
Ensembl ID: | ENSOGAG00000003419 | ||
Aliases: | None | ||
Description: | H2A histone family, member Z [Source:HGNC Symbol;Acc:4741] |
Percent Identity: | 79.07 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLK-SRTTSHGRVGATAAVYSAAILEYLTAEVLEL |
MAGGK..KDS.K.KTK..SRSQRAGLQF.VG.I..HLK..R.TSHG.VGATAAVYSAAILEYLT.EVLEL | |
Retrocopy | MAGGKSRKDSRKVKTKVISRSQRAGLQFLVGCIR*HLK<TRKTSHGCVGATAAVYSAAILEYLTTEVLEL |
Parental | AGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV |
A.NA.KDLKVK..TP.HLQLAI.GDE.L.SLIK.TIAG.G.IPHIHKSLIG.KGQQKTV | |
Retrocopy | A*NA*KDLKVKHVTPCHLQLAILGDEKLNSLIKVTIAGSGIIPHIHKSLIGNKGQQKTV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |