RetrogeneDB ID: | retro_ogar_3396 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873817.1:145594..145979(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000032153 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H2AFZ | ||
Ensembl ID: | ENSOGAG00000003419 | ||
Aliases: | None | ||
Description: | H2A histone family, member Z [Source:HGNC Symbol;Acc:4741] |
Percent Identity: | 83.21 % |
Parental protein coverage: | 99.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | AGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHR-HLKSRTTSHGRVGATAAVYSA-AILEYLTA-EVLE |
AGGKAGK.SGKAKTK.VS.SQRAGLQFPVG.I.R.HLKSRT.SHGRVG.TAAVY.A.AILE.LT...VLE | |
Retrocopy | AGGKAGKYSGKAKTKTVSGSQRAGLQFPVGHILR*HLKSRTSSHGRVGTTAAVYRA>AILEDLTI<RVLE |
Parental | LAGNASK-DLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV |
LAGN.SK.DLKVK.ITP.HLQLAIRGDEELDSLIKATIAG.GVIPHIHKS...KKGQQKTV | |
Retrocopy | LAGNSSK>DLKVKPITPHHLQLAIRGDEELDSLIKATIAGDGVIPHIHKSRTEKKGQQKTV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |