RetrogeneDB ID: | retro_chof_1411 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_284678:99..791(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1191 | ||
Ensembl ID: | ENSCHOG00000006123 | ||
Aliases: | None | ||
Description: | KIAA1191 [Source:HGNC Symbol;Acc:29209] |
Percent Identity: | 71.55 % |
Parental protein coverage: | 75.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | EEGEASVSSPAMTPSPATGSVDRVPVVKAKATHVIMSSLVTKQNQESIQRFEQQAGLRDAGYTPHKGLTT |
.E.......P....S.AT.SVD.V.VVKAKATHVIMSSL.TKQ.QESI..FEQQ.GLRDA.....KGLTT | |
Retrocopy | KERPVYLERPFCDTSVATRSVDKVLVVKAKATHVIMSSLITKQTQESIHHFEQQEGLRDADCISCKGLTT |
Parental | EDTKYLRMAEALHKLKLQSGEI-IKEEKQPASAQSTPSSTPHSSPKQKPRGWFTSGSSTALPGPNPSIMD |
..TKY..M.EALHKLKLQS.E..IKEEKQ.ASAQ.T.SST..SS.KQKPRGWFTSGSS.ALPGPN..IMD | |
Retrocopy | QETKYFQMSEALHKLKLQSREMMIKEEKQLASAQCTQSSTSQSSLKQKPRGWFTSGSSIALPGPNSNIMD |
Parental | SGSGDKDRN-SLEKWSLFGPRSLQKSDSGGFATQAYRGAQKPSPMELIQVQATRMAEDQAVFRPPKMDVP |
SGS.DK.R....EKW.LFGPRSLQKSDSGGFATQAYRGAQKPSPMEL..VQ.T..A.D.AVF.PPK...P | |
Retrocopy | SGSEDKERK<ASEKWNLFGPRSLQKSDSGGFATQAYRGAQKPSPMELMHVQVTHTAQDPAVFKPPKVEMP |
Parental | VMEGKKPLARPHNLKHRDLNVL |
VMEGK...AR.HNLKH.DLNVL | |
Retrocopy | VMEGKRLSARTHNLKHCDLNVL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |