RetrogeneDB ID: | retro_itri_960 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393350.1:2756415..2756948(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000025591 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1191 | ||
Ensembl ID: | ENSSTOG00000000946 | ||
Aliases: | None | ||
Description: | KIAA1191 [Source:HGNC Symbol;Acc:29209] |
Percent Identity: | 89.39 % |
Parental protein coverage: | 58.55 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MASRQPEVPALGPSGPLGKMSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLA-K |
MASRQ.EVPALG.SGPLGKMSL.IGMC.RAFS.DDALEDPAPMTPPP.DMGSIPWKPVIP..KYQHLA.K | |
Retrocopy | MASRQSEVPALGSSGPLGKMSLTIGMCHRAFS*DDALEDPAPMTPPPWDMGSIPWKPVIPKCKYQHLA<K |
Parental | EEEGEASVSHPAMTLSTVTDSTDKVPVVKAKATHVIMNSLITKQTQESIQRFEQQAGLRDAGYTPHKGLT |
EEEGEASVS..AMTLS.VTDSTDKVPVVKAKATHVIMNSLITKQTQESIQRFEQQAGLRDAGY.PHKGLT | |
Retrocopy | EEEGEASVSPSAMTLSIVTDSTDKVPVVKAKATHVIMNSLITKQTQESIQRFEQQAGLRDAGYAPHKGLT |
Parental | TEETKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSS |
TEETKYLRVAEALHKLKLQSGEIT.EEKQPA.A...P.S | |
Retrocopy | TEETKYLRVAEALHKLKLQSGEITEEEKQPAAALTLPIS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |