RetrogeneDB ID: | retro_ogar_1543 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873550.1:6530406..6531314(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000026465 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1191 | ||
Ensembl ID: | ENSOGAG00000008281 | ||
Aliases: | None | ||
Description: | KIAA1191 [Source:HGNC Symbol;Acc:29209] |
Percent Identity: | 84.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | MASRQPEVPALEPSGPLGKMSLPIGIYRRALSYDDALEDPTPMTPPPSDMGSIPWKPVIPERKYQHLAKV |
MASRQPEVPALE.SGPLGKMSL.I.IY..ALS.DDALEDPTP..PPPSDMGS.PWKPVIPERKYQHLAKV | |
Retrocopy | MASRQPEVPALELSGPLGKMSLSIRIYHGALSRDDALEDPTPTAPPPSDMGSMPWKPVIPERKYQHLAKV |
Parental | EEGEASVSSPAMTLSSAIDSTDKIPVVKAKATHVIMNSLITKQTQESIQRFEQQAGLRDAGYTPHKGLTT |
EE.EAS.SSPAMTLSSA.DS..K.PVVKAKATHVIM.SLITKQTQESIQ.FEQQAGLRDAGYTPHKGLTT | |
Retrocopy | EEEEASLSSPAMTLSSATDS-NKVPVVKAKATHVIMYSLITKQTQESIQHFEQQAGLRDAGYTPHKGLTT |
Parental | EESKYLRVAEALHKLKLQSGEITKEEKQPVSAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPSTMDS |
EESKYLRVAEALH.LKLQSGEITK.EKQ..SA.STPSS..HSSPKHRPRGWFTSGSSTALPGPNPSTMD. | |
Retrocopy | EESKYLRVAEALHRLKLQSGEITKTEKQLASAPSTPSSNLHSSPKHRPRGWFTSGSSTALPGPNPSTMDF |
Parental | GSGDKDRNPS-DKWSFFGPRSLQKYDSGSFATQAYQGAQKPSPMELI-RAQATRMAEDPASFKPPKMDIP |
GS..KDRNPS.DKWSF..PRSLQK.DSGSFA.QAY.GAQKPSP..L..RAQAT.MAEDPA.FK.PKMD.P | |
Retrocopy | GSRNKDRNPS<DKWSFSRPRSLQK*DSGSFAIQAY*GAQKPSPVALT<RAQATMMAEDPATFKLPKMDVP |
Parental | GMEGKKQP-PRTHNLKP-RDLNVLTPTGF |
.ME.KKQP.P.THNLKP..DLNVLTPTGF | |
Retrocopy | VMERKKQP<PQTHNLKP<HDLNVLTPTGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |