RetrogeneDB ID: | retro_ogar_1986 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873579.1:9667358..9668102(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000028868 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1191 | ||
Ensembl ID: | ENSOGAG00000008281 | ||
Aliases: | None | ||
Description: | KIAA1191 [Source:HGNC Symbol;Acc:29209] |
Percent Identity: | 75.79 % |
Parental protein coverage: | 81.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | PVIPERKYQHLAKVEEGEASVSSPAMTLSSAIDSTDKIPVVKAKATHVIMNSLITKQTQESIQRFEQQAG |
P..P..KYQHLAKVE.GEASV..PA.TL.S.ID.TDK.PV.KAKA...IMNSLI.KQTQ.SIQRF.QQA. | |
Retrocopy | PMTPQGKYQHLAKVEDGEASVTFPAVTLTSVIDKTDKVPVTKAKAIYGIMNSLIIKQTQKSIQRFKQQAK |
Parental | LRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEE-KQPVSAQSTPSSTPHSSPKHRPRGWFTSG |
LRDAG.TPHKGLTT.E.K.LRVAEALHKLK..SGE.T..E..QP.SAQ..PSST.HSSPK.RPRG.FT.. | |
Retrocopy | LRDAGSTPHKGLTTKEPKSLRVAEALHKLKPRSGEVTNTE<EQPASAQASPSSTSHSSPKRRPRGCFTPS |
Parental | SSTALPGPNPSTMDSGSGDKDRNPSDKWSFFGPRSLQKYDSGSFATQAYQGAQKPSPMELIRAQAT-RMA |
SST.LPGPNPSTMDSGSG.K.RN..DKWSF.GPRSLQKYD.GSFAT.AY.GAQKPSP.ELIRAQAT...A | |
Retrocopy | SSTELPGPNPSTMDSGSGNKNRNSPDKWSFSGPRSLQKYDPGSFATPAYRGAQKPSPVELIRAQAT<LRA |
Parental | EDPASFKPPKMDIPGMEGKKQPPRTHNLKPRDLNVLTP-TGF |
EDPA.FKPPKMD.PGM...KQPP.THNLKPR.L.VLTP.TGF | |
Retrocopy | EDPAAFKPPKMDMPGMGRTKQPPWTHNLKPRGLDVLTP<TGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |