RetrogeneDB ID: | retro_chof_1751 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_37570:11114..11769(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1191 | ||
Ensembl ID: | ENSCHOG00000006123 | ||
Aliases: | None | ||
Description: | KIAA1191 [Source:HGNC Symbol;Acc:29209] |
Percent Identity: | 57.92 % |
Parental protein coverage: | 71.8 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | MASRQPEVPALEPSGPLGKMSLPIGMYRRAFSYDDALE-DPTPMTPPPSDMGSIPWKPVIPERKYQHLAK |
.ASRQPE...LEP..PL.KMSLPI.....AFS.DD.....P.PM.PPP...G...WKPV....KYQ.L.K | |
Retrocopy | VASRQPELLPLEPNWPLRKMSLPITTSLWAFSCDDTSR<GPMPMAPPPLNLGNYLWKPVRLGHKYQYLTK |
Parental | VEEGEASVSSPAMTPSPATGSVDRVPVVKAKATHVIMSSLVTKQNQESIQRFEQQAGLRDAGYTPHKGLT |
V...EASV.SP.MT.S....S....P.VKAKA.............QESIQ.FE.QAGLRDAG.TPHKG.T | |
Retrocopy | VGNEEASVFSPPMTLSLTIHSMYVFPMVKAKAAKGYHKFSHLQKIQESIQHFEEQAGLRDAGCTPHKGFT |
Parental | TEDTKYLRMAEALHKLKLQSGEIIKEEKQPASAQSTPSSTPHSSPKQKP-RGWFTSGSSTALPGPNPSIM |
T..TKYL.MA.ALHKLKLQ.GE.IK.EKQ.ASA...P..T..SS.KQKP.RG...SGSSTAL.G.N.S.. | |
Retrocopy | TKSTKYL*MADALHKLKLQTGETIKKEKQLASA*FLPRNTTYSSLKQKP<RG*YSSGSSTALSG*NSSTI |
Parental | DSGSGDKDRNS |
.SG.GD.D.NS | |
Retrocopy | ESGIGD*DKNS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |