RetrogeneDB ID: | retro_lafr_313 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_12:40349084..40349721(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1191 | ||
Ensembl ID: | ENSLAFG00000028878 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.37 % |
Parental protein coverage: | 69.41 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | VPVVKAKATHVIMNSLITKQTQESIQRFEQQAGLRDAGYTPHKGLTTEETKYLRVAEALHKLKLQ-SGEI |
VPVV..KATHVIMNSLITK...E....FEQQA.L.DAGYT.HKGLTT...KYL.VAEALHKLKLQ.SGEI | |
Retrocopy | VPVV*VKATHVIMNSLITKEA*EHVRLFEQQARLTDAGYTSHKGLTTKGNKYL*VAEALHKLKLQ<SGEI |
Parental | IK-EEKQLA-SPQSTPSSTPHSSPKQKSRGWFTSGSSTALPAPSSSSMDSGSGDKDRNPSDKWSLFGPRS |
.K.E.........S.P...P..SPKQKSRGWF.SG.STA.P...SS...S.SGDKDR..SDKWSLFGPRS | |
Retrocopy | TKEEKQSVS<NQPSPPQAAPPPSPKQKSRGWFISGPSTAFPGSNSSTVGS*SGDKDRTSSDKWSLFGPRS |
Parental | LQKSDSG-FATQAYRGAQKPSPMELIRVQATRVAEDPAAFKPPKMDIPVVEGKKQVPRAHNLKPRDLNVL |
L..SDSG.FATQAYRGAQKPSP.E.I.VQA.R.AED..A.KPP...IPV.EGKKQ.P..H.LKP.DLNVL | |
Retrocopy | L*ESDSGHFATQAYRGAQKPSPVEMIHVQAIRMAEDSVALKPPNTYIPVIEGKKQEPWIHKLKPPDLNVL |
Parental | TPTGF |
..TGF | |
Retrocopy | LLTGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |