RetrogeneDB ID: | retro_etel_2050 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_41583:413..773(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSETEG00000004002 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 70.73 % |
Parental protein coverage: | 57. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | ELVRTKTLVKNCIVLVD---STPYRQWYESHYALPLGR-KKGAKLTPEEEETLNKKRSKKIQKKYDERKK |
ELV.TKTLVKNCI.L.D...STPY.Q...SHY.L.LG..KKGAKLTPEEE..LNKK.SKKIQK.YDERK. | |
Retrocopy | ELVHTKTLVKNCIALIDSTLSTPYPQ*CKSHYDLLLGG<KKGAKLTPEEE-ILNKK*SKKIQKIYDERKR |
Parental | NAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEF-YLRKIKARK |
NAK......E.F.QGKLLA.I.SRPGQ...ADGYVLE.KEL.F.YLRKIKA.K | |
Retrocopy | NAKRAVRILEEF*QGKLLAYIDSRPGQYSQADGYVLERKELKF>YLRKIKALK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |