RetrogeneDB ID: | retro_etel_147 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2634:180257..180613(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSETEG00000004002 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 80. % |
Parental protein coverage: | 57.49 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LVRTKTLVKNCIVLVDSTPYRQWYESHYALPLGRKKGAKLTPEEEETLNKKRSKKIQKKYDERKKNAKIS |
LVRTK.LVKNCIVL.DSTPYRQW.E.H.ALPLG.KK...LTPEE.E.LN.K.S.KIQKKYDE.KKN.KIS | |
Retrocopy | LVRTKMLVKNCIVLTDSTPYRQWCEPHAALPLGGKK*PTLTPEEKEILNEK*SRKIQKKYDEQKKNVKIS |
Parental | SLLEEQFQQ-GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK |
SL.EE.FQQ.GKLLACIASR.GQCGRAD..VL..KELEFYLRKIKARKGK | |
Retrocopy | SLPEEPFQQ<GKLLACIASRAGQCGRADASVLVEKELEFYLRKIKARKGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |