RetrogeneDB ID: | retro_etel_368 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6203:114511..114846(+) | ||
Located in intron of: | ENSETEG00000020320 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSETEG00000004002 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 74.34 % |
Parental protein coverage: | 54.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | ELVRTKTLVKNCIVLVDSTPYRQWYESHYALPLGRKKGAKLTPEEEETLNKKRSKKIQKKYDERKKNAKI |
ELV.TKT.VKNC.V..DSTPY.QWYESH.ALPLGRK..AKLT..EEE.LNK..SK.IQKKYDERKKNAK. | |
Retrocopy | ELVHTKTPVKNCNVPIDSTPYHQWYESHCALPLGRKRDAKLTSDEEEILNKQQSKEIQKKYDERKKNAKR |
Parental | SSLLEEQFQQGKLLAC-IASRPGQCGRADGYVLEGKELEFYLR |
..LL.E.F.QGKL.A..I.SRPGQ.GRA.G.VLEGKELE.YLR | |
Retrocopy | ICLLGEPFWQGKLPAA<ITSRPGQRGRALG*VLEGKELEGYLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |