RetrogeneDB ID: | retro_etel_395 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6713:157679..157973(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSETEG00000004002 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 55.66 % |
Parental protein coverage: | 50.24 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | ELVRTKTLVKNCIVLV-DSTPYRQWYESHYALPLGRKKGAKLTPEEEETLNKKRSKKIQK-KYDERKKNA |
ELV.TK.LVKN..VL.....P..QW..SH..LPLG.KK..KLTP..E.....K.S...QK..Y.ERKKNA | |
Retrocopy | ELVWTKPLVKNITVLM<GGPPDHQWSKSH*TLPLGCKKEVKLTP--EKCCLFKQSRTFQK>RYNERKKNA |
Parental | KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEG |
K.SSLL.EQF..G.L....A.R.GQ...ADGYVL.G | |
Retrocopy | KSSSLL-EQFREGTLGIHAAPRAGQ---ADGYVLKG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |