RetrogeneDB ID: | retro_sara_145 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_4477:619273..619478(+) | ||
Located in intron of: | ENSSARG00000009281 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 55.71 % |
Parental protein coverage: | 53.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLRLR |
..L.GKT..LE..PS......KA.IQDKEGIP..QQ.L..A..Q..D.GRT.SD..IQ..S..HLVLRLR | |
Retrocopy | ESLVGKTVALEATPSERRGKAKARIQDKEGIPASQQGLVSAATQRKD>GRTGSDHRIQR-SPVHLVLRLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |