RetrogeneDB ID: | retro_sara_192 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_659:79498..79714(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 65.79 % |
Parental protein coverage: | 59.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQ.FVKTL.GKTITLEVEP..TI.NVK.K...KE.I..DQQRLIF..KQL......SDYNIQK.S....V | |
Retrocopy | MQTFVKTLRGKTITLEVEPFNTIKNVKNKM*EKESISLDQQRLIFSSKQLTGRWPHSDYNIQKGS----V |
Parental | LRLRGG |
LRL.GG | |
Retrocopy | LRLKGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |