RetrogeneDB ID: | retro_sara_331 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_168436:4935..5157(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 58.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQK |
PS...EN..AKI..K...PPDQQRL.F.GK.LEDG.TL.D.NIQKE..L.LVLRL..GI.E..LR.LAQK | |
Retrocopy | PSEITENARAKIKRKVS-PPDQQRLLFSGKNLEDGCTLLDHNIQKEPILYLVLRLHRGIKESLLR*LAQK |
Parental | YNCEK |
YNCEK | |
Retrocopy | YNCEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |