RetrogeneDB ID: | retro_sara_599 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_237216:19075..19456(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 82.17 % |
Parental protein coverage: | 99.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MQIFVKTL-TGKTITLEVEPSDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH |
MQIFVKTL..GKTI.L.VE.SDT.EN.KA.KIQDKEGI.PD.QRLIFAGKQLE.GRTLS..NIQ.ESTLH | |
Retrocopy | MQIFVKTL<DGKTIPLKVELSDTLENIKA>KIQDKEGILPDHQRLIFAGKQLEGGRTLSNHNIQEESTLH |
Parental | LVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKRL |
LVLR..G.IIEPSLRQ.AQKYNCEKMI.RKCYA.LHP.AVNCRKKK.GHTNNL.PKKRL | |
Retrocopy | LVLRFCGDIIEPSLRQRAQKYNCEKMISRKCYACLHPHAVNCRKKKSGHTNNLSPKKRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |