RetrogeneDB ID: | retro_sara_94 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_2616:221361..221640(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 68.09 % |
Parental protein coverage: | 73.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
..IFVKTL.GKTITLEVE..DT.ENVKAK.QDKEG.PP.Q..LIFAGKQLEDG.TLSDYNIQ.ESTLHLV | |
Retrocopy | IEIFVKTLMGKTITLEVELLDTKENVKAKTQDKEGFPPNQ*KLIFAGKQLEDGCTLSDYNIQ-ESTLHLV |
Parental | LRLRGGIIEPSLRQLAQKYNCEKM |
LRL.G............K.N..K. | |
Retrocopy | LRLWGSAKKRKKSYTTPKKNKHKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |