RetrogeneDB ID: | retro_sara_256 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_134322:1705..1930(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 84. % |
Parental protein coverage: | 58.59 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKTLTGKTITL.V.PSDTIENV.A..QDKEGIP..QQRL.FAGKQLE.G.TL.DYNIQKESTLHLV | |
Retrocopy | MQIFVKTLTGKTITLKVQPSDTIENVEARVQDKEGIPLGQQRLVFAGKQLEAGHTLPDYNIQKESTLHLV |
Parental | LRLRG |
.RLRG | |
Retrocopy | FRLRG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |