RetrogeneDB ID: | retro_sara_164 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_5365:74413..74646(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSSARG00000000984 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 60.76 % |
Parental protein coverage: | 60.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD-YNIQKESTLHLVLRLRGGIIE |
...TL..E..DTIEN..AK.QDK.GIPP.QQR.IFAGK.LE.G.TLSD.YNIQKES.LHLV.RLRG.... | |
Retrocopy | RRLTLKAESLDTIENIEAKVQDKKGIPPGQQRMIFAGK*LEAGHTLSD<YNIQKESILHLVFRLRGRSLT |
Parental | PSLRQLAQK |
...R..... | |
Retrocopy | LLHRRISRR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |