RetrogeneDB ID: | retro_shar_339 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841394.1:944200..944473(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 62.64 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
M.K..KKVGIV.KYG...G..LRKMVKKIEISQH......F.GK...K..AVG..HC.S.MKTV..G.WT | |
Retrocopy | MVKYIKKVGIVHKYGANNGTFLRKMVKKIEISQHSMNIFFFFGKITIKG*AVGTCHCASFMKTVTDGTWT |
Parental | YNTTSAVTVKSAIRRLKELKD |
Y..TSAV.VK.AI.RLKELK. | |
Retrocopy | YLITSAVRVKTAIKRLKELKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |