RetrogeneDB ID: | retro_tbel_2178 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_103700:1572..1833(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 73.12 % |
Parental protein coverage: | 97.83 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | AKRTKKVGIVGKYG-TRYGAS-LRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGA- |
AK.TKKVGI.GKYG.T..G.S.L.K.VKK.EISQ.AK.TC.F.GKTK..R.A.GIWHCGSCMKTV.GGA. | |
Retrocopy | AKCTKKVGISGKYG<TSCGTS<LWKVVKKTEISQLAKDTCFFSGKTK--RQAMGIWHCGSCMKTVVGGA< |
Parental | WTYNTTSAVTVKSAIRRLKELKD |
..YNTTSAVTV.SA.RRLKE.KD | |
Retrocopy | QAYNTTSAVTVRSATRRLKEAKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |