RetrogeneDB ID: | retro_shar_642 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL856907.1:1652898..1653178(+) | ||
Located in intron of: | ENSSHAG00000014723 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 71.28 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGG-AW |
MAK.TKKV.IV.KYGT.YG.SLRK.VKKIEI.QH.KYT.SFCGK.K.KR.AV.I.HC.SC.KT.....AW | |
Retrocopy | MAKCTKKVKIVSKYGTYYGTSLRKTVKKIEICQHSKYTDSFCGKIKVKRWAVDI*HCESCLKTNSSWCAW |
Parental | TYNTTSAVTVKSAI-RRLKELKDQ |
.YNTT.A.TVKSAI.R.LKELK.Q | |
Retrocopy | IYNTTLAITVKSAI>RKLKELKNQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |