RetrogeneDB ID: | retro_vpac_307 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_621:292483..292756(+) | ||
Located in intron of: | ENSVPAG00000002897 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSVPAG00000002529 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 88.04 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAK.TKKVGIV.KYGT..GASL.KMVKKIEISQHAKYTCSFCGKTKMKR.A.GIWHCGSCMK.VAGGAWT | |
Retrocopy | MAKHTKKVGIVSKYGTHFGASLWKMVKKIEISQHAKYTCSFCGKTKMKR*AMGIWHCGSCMKMVAGGAWT |
Parental | YNTTSAVTVKSAIRRLKELKDQ |
Y.TTS.VTVKSAIRRLKELKD. | |
Retrocopy | Y-TTSVVTVKSAIRRLKELKDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |