RetrogeneDB ID: | retro_tbel_3784 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_15325:112271..112540(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 73.91 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRK-MVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW |
MAK.T....IVGKY.T.Y.AS.RK.MVKKIE.SQ.AKYTCS.CGK.KMKR.A.G.WHC.SC.KTVA..AW | |
Retrocopy | MAKCTN-IQIVGKYRTHYSASHRK<MVKKIETSQQAKYTCSSCGKIKMKR*AKGTWHCVSCKKTVAIVAW |
Parental | TYNTTSAVTVKSAIRRLKELKD |
TYNTTSAVTVKS..RRL.ELKD | |
Retrocopy | TYNTTSAVTVKSTVRRLQELKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |