RetrogeneDB ID: | retro_tbel_209 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1461:8537..8779(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 61.45 % |
Parental protein coverage: | 89.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYG-TRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW |
MAK.TKK.GIVGK......G.SL.KM..K...S.H.KY..SFCGKTK.KR.A.G...CGSCMKT.AGGAW | |
Retrocopy | MAKGTKKMGIVGKQR<AHNGGSLWKMMNKTK-SHHGKYAGSFCGKTKVKR*ATGF*ACGSCMKTIAGGAW |
Parental | TYNTTSAVTVKSA |
T..TTS..TV.S. | |
Retrocopy | TNMTTSTITVISS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |