RetrogeneDB ID: | retro_tbel_1204 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4092:60625..60900(-) | ||
Located in intron of: | ENSTBEG00000005454 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 68.09 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGTRYGASL-RKMVKKIEISQHAK-YTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGA |
MAKR.KKVGIV.KYGT..GASL.RK...K...........CSFCG.TKMKRRA.GIW.CGSCM..VAGGA | |
Retrocopy | MAKRIKKVGIVCKYGTHNGASL>RKW*RKLKSASTPS>HFCSFCGRTKMKRRAEGIWRCGSCMNSVAGGA |
Parental | WTYNTTSAVTVKSAIRRLKELKDQ |
WT..T....TVKSAIRRLKELKDQ | |
Retrocopy | WTC-THFSFTVKSAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |