Parental gene: | ENSAMEG00000006872 |
| Aliases: | None |
| Description: | None |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL193569.1:40967..42906(+) |
>ENSAMEG00000006872
TGCGGATCAAAACGTGAGTGTATCTCCATCCACGTCGGTCAGGCTGGTGTCCAGATCGGCAATGCCTGCTGGGAGCTCTA
TTGCCTGGAACACGGCATTCAGCCCGATGGCCAGATGCCAAGTGACAAGACCATCGGGGGAGGAGATGACTCCTTCAACA
CCTTCTTCAGTGAGACGGGCGCTGGCAAGCACGTGCCCAGGGCCGTGTTTGTAGACCTGGAACCCACAGTCATTGATGAA
GTTCGCACTGGCACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCACAGGCAAGGAAGATGCTGCCAACAACTACGC
CCGTGGGCACTACACCATTGGCAAGGAGATCATTGACCTCGTCTTGGACCGAATTCGGAAGCTGGCTGACCAGTGCACAG
GTCTTCAGGGCTTCTTGGTTTTCCACAGCTTTGGAGGGGGAACTGGTTCCGGGTTCACCTCCCTGCTGATGGAACGTCTC
TCTGTCGATTATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCCAGGTTTCCACAGCTGTAGTTGAGCC
CTACAACTCCATCCTCACTACCCACACCACCCTGGAGCACTCTGATTGTGCCTTCATGGTAGACAACGAGGCCATCTATG
ACATCTGTCGTAGAAACCTCGATATTGAACGCCCAACCTACACTAACCTTAACCGCCTTATTAGCCAGATTGTGTCCTCC
ATCACTGCTTCCCTCAGATTTGATGGAGCGCTGAATGTTGATCTGACGGAATTCCAGACCAACCTGGTGCCCTATCCCTG
CATCCACTTCCCTCTGGCCACTTATGCCCCCGTCATCTCTGCTGAGAAAGCCTACCATGAACAGCTTTCTGTAGCAGAGA
TCACCAACGCGTGCTTTGAGCCAGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGCTGCCTG
TTGTACCGTGGCGACGTGGTTCCCAAAGATGTCAATGCTGCTATTGCCACCATCAAGACCAAGCGCAGCATCCAGTTCGT
GGACTGGTGCCCCACCGGCTTCAAAGTGGGCATTAATTACCAGCCTCCCACTGTGGTACCTGGCGGAGACCTGGCCAAAG
TCCAGCGGGCTGTGTGCATGCTGAGCAACACCACAGCCATCGCTGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTG
ATGTATGCCAAGCGTGCCTTTGTTCACTGGTATGTGGGGGAGGGCATGGAGGAAGGAGAGTTTTCTGAGGCCCGTGAGGA
CATGGCTGCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGTGAAGAAGAAGGAGAGGAAT
ACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011042 | within_species_paralog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000008640 | ortholog_one2one | 8 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000008444 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000013016 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027011 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000028689 | possible_ortholog | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000010021 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000017551 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002622 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009435 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001671 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013266 | ortholog_one2one | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004794 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_1162 | 74.41 | 64.54 | Please wait, loading  |
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| 2. | retro_amel_1367 | 74.70 | 55.29 | Please wait, loading |
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| 3. | retro_amel_1387 | 75.69 | 63.22 | Please wait, loading |
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| 4. | retro_amel_1895 | 74.51 | 88.99 | Please wait, loading |
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Download FASTA sequences of all ENSAMEG00000006872 retrocopies