Parental gene:

ENSAMEG00000006872

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193569.1:40967..42906(+)


>ENSAMEG00000006872
TGCGGATCAAAACGTGAGTGTATCTCCATCCACGTCGGTCAGGCTGGTGTCCAGATCGGCAATGCCTGCTGGGAGCTCTA
TTGCCTGGAACACGGCATTCAGCCCGATGGCCAGATGCCAAGTGACAAGACCATCGGGGGAGGAGATGACTCCTTCAACA
CCTTCTTCAGTGAGACGGGCGCTGGCAAGCACGTGCCCAGGGCCGTGTTTGTAGACCTGGAACCCACAGTCATTGATGAA
GTTCGCACTGGCACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCACAGGCAAGGAAGATGCTGCCAACAACTACGC
CCGTGGGCACTACACCATTGGCAAGGAGATCATTGACCTCGTCTTGGACCGAATTCGGAAGCTGGCTGACCAGTGCACAG
GTCTTCAGGGCTTCTTGGTTTTCCACAGCTTTGGAGGGGGAACTGGTTCCGGGTTCACCTCCCTGCTGATGGAACGTCTC
TCTGTCGATTATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCCAGGTTTCCACAGCTGTAGTTGAGCC
CTACAACTCCATCCTCACTACCCACACCACCCTGGAGCACTCTGATTGTGCCTTCATGGTAGACAACGAGGCCATCTATG
ACATCTGTCGTAGAAACCTCGATATTGAACGCCCAACCTACACTAACCTTAACCGCCTTATTAGCCAGATTGTGTCCTCC
ATCACTGCTTCCCTCAGATTTGATGGAGCGCTGAATGTTGATCTGACGGAATTCCAGACCAACCTGGTGCCCTATCCCTG
CATCCACTTCCCTCTGGCCACTTATGCCCCCGTCATCTCTGCTGAGAAAGCCTACCATGAACAGCTTTCTGTAGCAGAGA
TCACCAACGCGTGCTTTGAGCCAGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGCTGCCTG
TTGTACCGTGGCGACGTGGTTCCCAAAGATGTCAATGCTGCTATTGCCACCATCAAGACCAAGCGCAGCATCCAGTTCGT
GGACTGGTGCCCCACCGGCTTCAAAGTGGGCATTAATTACCAGCCTCCCACTGTGGTACCTGGCGGAGACCTGGCCAAAG
TCCAGCGGGCTGTGTGCATGCTGAGCAACACCACAGCCATCGCTGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTG
ATGTATGCCAAGCGTGCCTTTGTTCACTGGTATGTGGGGGAGGGCATGGAGGAAGGAGAGTTTTCTGAGGCCCGTGAGGA
CATGGCTGCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGTGAAGAAGAAGGAGAGGAAT
ACTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011042 within_species_paralog 2 retrogenes
retro_amel_488, retro_amel_518,
Canis familiaris ENSCAFG00000008640 ortholog_one2one 8 retrogenes
retro_cfam_1481, retro_cfam_1751, retro_cfam_1895, retro_cfam_1917, retro_cfam_1979, retro_cfam_2000, retro_cfam_463, retro_cfam_926,
Choloepus hoffmanni ENSCHOG00000008444 possible_ortholog 2 retrogenes
retro_chof_179, retro_chof_360,
Cavia porcellus ENSCPOG00000013016 ortholog_one2one 1 retrogene
retro_cpor_96,
Felis catus ENSFCAG00000027011 ortholog_one2one 1 retrogene
retro_fcat_588,
Felis catus ENSFCAG00000028689 possible_ortholog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Loxodonta africana ENSLAFG00000010021 ortholog_one2one 1 retrogene
retro_lafr_326,
Microcebus murinus ENSMICG00000017551 ortholog_one2one 3 retrogenes
retro_mmur_144, retro_mmur_705, retro_mmur_885,
Myotis lucifugus ENSMLUG00000002622 ortholog_one2one 4 retrogenes
retro_mluc_154, retro_mluc_186, retro_mluc_234, retro_mluc_270,
Otolemur garnettii ENSOGAG00000009435 possible_ortholog 1 retrogene
retro_ogar_240,
Tupaia belangeri ENSTBEG00000001671 ortholog_one2one 1 retrogene
retro_tbel_3700,
Tarsius syrichta ENSTSYG00000013266 ortholog_one2one 7 retrogenes
retro_tsyr_1014, retro_tsyr_1278, retro_tsyr_1281, retro_tsyr_1679, retro_tsyr_1834, retro_tsyr_243, retro_tsyr_6,
Tursiops truncatus ENSTTRG00000004794 ortholog_one2one 1 retrogene
retro_ttru_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_1162 74.41 64.54
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_amel_1367 74.70 55.29
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_amel_1387 75.69 63.22
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_amel_1895 74.51 88.99
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSAMEG00000006872 retrocopies