Parental gene:

CDC42, ENSOPRG00000005331

Aliases:None
Description:cell division cycle 42 [Source:HGNC Symbol;Acc:1736]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_366:52445..100652(+)


>ENSOPRG00000005331
ATGCAGACAATTAAATGTGTTGTTGTGGGCGATGGTGCTGTTGGTAAAACATGTCTCCTGATTTCCTACACAACAAATAA
ATTTCCATCAGAATATGTACCGACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAGCCATATACTCTTG
GACTTTTTGATACTGCAGGGCAAGAGGATTATGATAGATTACGGCCACTGAGTTATCCACAAACAGATGTATTTTTAGTC
TGTTTTTCAGTGGTTTCTCCATCCTCATTTGAAAATGTGAAAGAAAAGTGGGTGCCTGAGATAACTCACCATTGTCCAAA
GACTCCTTTCTTGCTTGTCGGGACCCAAATTGATCTCAGAGATGATCCCTCTACAATTGAGAAACTTGCCAAGAACAAAC
AGAAGCCTATCACTCCAGAGACTGCTGAAAAGCTGGCCCGCGATCTGAAAGCTGTCAAGTATGTGGAGTGTTCTGCGCTC
ACACAGAAAGGCCTAAAGAATGTATTTGATGAAGCAATATTGGCTGCCCTGGAGCCTCCCGAACCGAAGAAGAGCCGCAG
GTGTGTGCTGCTATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014707 possible_ortholog 5 retrogenes
retro_cfam_1587, retro_cfam_1970, retro_cfam_2189, retro_cfam_88, retro_cfam_89,
Choloepus hoffmanni ENSCHOG00000005306 possible_ortholog 10 retrogenes
retro_chof_103, retro_chof_1044, retro_chof_1195, retro_chof_1853, retro_chof_2055, retro_chof_2105, retro_chof_2331, retro_chof_2407, retro_chof_50, retro_chof_800,
Callithrix jacchus ENSCJAG00000005912 possible_ortholog 6 retrogenes
retro_cjac_1275, retro_cjac_1808, retro_cjac_1826, retro_cjac_2251, retro_cjac_751, retro_cjac_911,
Cavia porcellus ENSCPOG00000006543 ortholog_one2one 4 retrogenes
retro_cpor_1168, retro_cpor_286, retro_cpor_33, retro_cpor_887,
Equus caballus ENSECAG00000019180 possible_ortholog 1 retrogene
retro_ecab_11,
Echinops telfairi ENSETEG00000004443 ortholog_one2one 1 retrogene
retro_etel_2010,
Felis catus ENSFCAG00000004853 ortholog_one2many 4 retrogenes
retro_fcat_129, retro_fcat_1421, retro_fcat_1579, retro_fcat_896,
Monodelphis domestica ENSMODG00000016078 ortholog_one2one 3 retrogenes
retro_mdom_18, retro_mdom_181, retro_mdom_537,
Mustela putorius furo ENSMPUG00000015999 possible_ortholog 2 retrogenes
retro_mputfur_308, retro_mputfur_957,
Oryctolagus cuniculus ENSOCUG00000009986 possible_ortholog 1 retrogene
retro_ocun_60,
Otolemur garnettii ENSOGAG00000014261 possible_ortholog 1 retrogene
retro_ogar_131,
Sorex araneus ENSSARG00000005184 possible_ortholog 3 retrogenes
retro_sara_10, retro_sara_220, retro_sara_3,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_868 94.19 81.15
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2. retro_opri_995 77.58 85.86
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Download FASTA sequences of all ENSOPRG00000005331 retrocopies