RetrogeneDB ID: | retro_chof_103 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_1992:90037..90507(-) | ||
Located in intron of: | ENSCHOG00000001291 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000005306 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80. % |
Parental protein coverage: | 83.25 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSY |
TIKC.VVGDGA.GKTCLLISYTTNKFPSEYV..VFDNYAVTVM.GGEPYTLGLFDT..QED.D....LSY | |
Retrocopy | TIKCIVVGDGAIGKTCLLISYTTNKFPSEYVLPVFDNYAVTVMFGGEPYTLGLFDTTRQEDFDGF*SLSY |
Parental | PQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETA |
PQ.DVFLVCF.VVSPSSF.NVKEK.VPEI.HH.PKTPFLLVGTQ..LRD..STIEKLAKNKQK.IT...A | |
Retrocopy | PQIDVFLVCFPVVSPSSF*NVKEK*VPEIIHHSPKTPFLLVGTQTHLRDNRSTIEKLAKNKQKSIT--VA |
Parental | EKLARDLK-AVKYVECSALT |
EKL..DLK..VKY.ECS.LT | |
Retrocopy | EKLSCDLK<GVKYKECSTLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |