RetrogeneDB - Parental gene ENSCHOG00000005306 details

                            
>ENSCHOG00000005306
ATGCAGACAATTAAGTGCGTTGTTGTGGGTGATGGTGCCGTTGGTAAAACATGTCTCCTGATATCCTACACAACAAACAA

ATTTCCATCTGAATATGTACCGACTGTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAGCCATATACTCTCG

GACTTTTCGATACCGCAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAAACAGATGTATTTCTAGTC

TGTTTTTCAGTGGTATCTCCATCCTCATTTGAAAATGTGAAAGAAAAGTGGGTACCTGAGATAACTCACCACTGTCCAAA

GACTCCTTTCTTGCTTGTTGGGACCCAAATTGATCTCAGAGATGACCCCTCTACTATTGAGAAACTTGCCAAGAACAAAC

AGAAGCCTATCACTCCGGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAATATGTGGAGTGTTCTGCTCTC

ACACAGAGAGGTCTGAAGAATGTGTTTGATGAGGCTATCCTAGCTGCCCTCGAGCCTCCGGAAACTCAACCCAAAAGGAA

GTGCTGTATATTTTAA

Species	Parental gene accession	Homology type	Retrogenes number
Canis familiaris	ENSCAFG00000014707	possible_ortholog	5 retrogenes	retro_cfam_1587, retro_cfam_1970, retro_cfam_2189, retro_cfam_88, retro_cfam_89,
Choloepus hoffmanni	ENSCHOG00000000549	within_species_paralog	3 retrogenes	retro_chof_2030, retro_chof_457, retro_chof_914,
Callithrix jacchus	ENSCJAG00000005912	possible_ortholog	6 retrogenes	retro_cjac_1275, retro_cjac_1808, retro_cjac_1826, retro_cjac_2251, retro_cjac_751, retro_cjac_911,
Cavia porcellus	ENSCPOG00000006543	possible_ortholog	4 retrogenes	retro_cpor_1168, retro_cpor_286, retro_cpor_33, retro_cpor_887,
Dipodomys ordii	ENSDORG00000010374	possible_ortholog	3 retrogenes	retro_dord_17, retro_dord_464, retro_dord_552,
Equus caballus	ENSECAG00000019180	possible_ortholog	1 retrogene	retro_ecab_11,
Echinops telfairi	ENSETEG00000004443	possible_ortholog	1 retrogene	retro_etel_2010,
Felis catus	ENSFCAG00000004853	possible_ortholog	4 retrogenes	retro_fcat_129, retro_fcat_1421, retro_fcat_1579, retro_fcat_896,
Homo sapiens	ENSG00000070831	possible_ortholog	6 retrogenes	retro_hsap_2775, retro_hsap_2968, retro_hsap_3028, retro_hsap_3404, retro_hsap_3848, retro_hsap_4013,
Gorilla gorilla	ENSGGOG00000024439	possible_ortholog	5 retrogenes	retro_ggor_1932, retro_ggor_2057, retro_ggor_2303, retro_ggor_2593, retro_ggor_2695,
Myotis lucifugus	ENSMLUG00000013365	possible_ortholog	4 retrogenes	retro_mluc_1076, retro_mluc_1864, retro_mluc_2456, retro_mluc_905,
Macaca mulatta	ENSMMUG00000022009	possible_ortholog	8 retrogenes	retro_mmul_1449, retro_mmul_1612, retro_mmul_1685, retro_mmul_1900, retro_mmul_1932, retro_mmul_24, retro_mmul_349, retro_mmul_598,
Monodelphis domestica	ENSMODG00000016078	possible_ortholog	3 retrogenes	retro_mdom_18, retro_mdom_181, retro_mdom_537,
Mustela putorius furo	ENSMPUG00000015999	ortholog_one2one	2 retrogenes	retro_mputfur_308, retro_mputfur_957,
Mus musculus	ENSMUSG00000006699	possible_ortholog	3 retrogenes	retro_mmus_2816, retro_mmus_2995, retro_mmus_3170,
Nomascus leucogenys	ENSNLEG00000008198	ortholog_one2one	4 retrogenes	retro_nleu_2029, retro_nleu_2949, retro_nleu_3007, retro_nleu_679,
Oryctolagus cuniculus	ENSOCUG00000009986	possible_ortholog	1 retrogene	retro_ocun_60,
Otolemur garnettii	ENSOGAG00000014261	possible_ortholog	1 retrogene	retro_ogar_131,
Ochotona princeps	ENSOPRG00000005331	possible_ortholog	2 retrogenes	retro_opri_868, retro_opri_995,
Pongo abelii	ENSPPYG00000001755	possible_ortholog	6 retrogenes	retro_pabe_2240, retro_pabe_2461, retro_pabe_2801, retro_pabe_3215, retro_pabe_3239, retro_pabe_3295,
Rattus norvegicus	ENSRNOG00000013536	possible_ortholog	1 retrogene	retro_rnor_2062,
Sorex araneus	ENSSARG00000005184	possible_ortholog	3 retrogenes	retro_sara_10, retro_sara_220, retro_sara_3,
Sus scrofa	ENSSSCG00000003520	possible_ortholog	1 retrogene	retro_sscr_899,
Ictidomys tridecemlineatus	ENSSTOG00000000805	possible_ortholog	4 retrogenes	retro_itri_1158, retro_itri_1602, retro_itri_1615, retro_itri_431,
Tupaia belangeri	ENSTBEG00000002614	possible_ortholog	17 retrogenes	retro_tbel_1091, retro_tbel_1379, retro_tbel_1697, retro_tbel_1711, retro_tbel_183, retro_tbel_2320, retro_tbel_2447, retro_tbel_2721, retro_tbel_4016, retro_tbel_4168, retro_tbel_4184, retro_tbel_4273, retro_tbel_4427, retro_tbel_584, retro_tbel_585, retro_tbel_860, retro_tbel_873,
Tarsius syrichta	ENSTSYG00000000679	possible_ortholog	11 retrogenes	retro_tsyr_1575, retro_tsyr_1597, retro_tsyr_1854, retro_tsyr_1976, retro_tsyr_2048, retro_tsyr_2098, retro_tsyr_352, retro_tsyr_387, retro_tsyr_539, retro_tsyr_66, retro_tsyr_963,
Tursiops truncatus	ENSTTRG00000005708	possible_ortholog	2 retrogenes	retro_ttru_118, retro_ttru_54,
Vicugna pacos	ENSVPAG00000006919	ortholog_one2one	3 retrogenes	retro_vpac_13, retro_vpac_451, retro_vpac_542,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_chof_50	98.43	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_chof_103	80.00	83.25	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_chof_800	94.68	98.43	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_chof_1044	93.16	99.48	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_chof_1195	67.08	82.72	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_chof_1853	90.58	99.48	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_chof_2055	95.26	99.48	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_chof_2105	77.72	99.48	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_chof_2331	50.82	63.35	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_chof_2407	72.73	50.79	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSCHOG00000005306 retrocopies

Parental gene:	ENSCHOG00000005306
Aliases:	None
Description:	None
Organism:	*Sloth (Choloepus hoffmanni)*
Coordinates:	GeneScaffold_646:8748..37169(+)

Parental gene:

ENSCHOG00000005306