RetrogeneDB ID: | retro_chof_1195 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_22229:16440..16908(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000005306 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.08 % |
Parental protein coverage: | 82.72 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MQTIKCVVVGDGAVGKTCLLI-SYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP |
.QT..C.V.GDG...KTCLLI.SYTTN.FPSEYVPTVFDN.AVTVM.GGE.YTLG.F.TA.QED.DRL.P | |
Retrocopy | LQTTECIV-GDGTLDKTCLLI>SYTTNTFPSEYVPTVFDNCAVTVMFGGELYTLGHFHTAEQEDDDRL*P |
Parental | LSY-PQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRDDPSTIEKLAKNKQKPI |
LSY.....VFLVCF..VS.SSFENV.EKWVPEI.HHCPKTPF..L.G........P.....L.......I | |
Retrocopy | LSY<SIAEVFLVCFPSVSLSSFENVEEKWVPEISHHCPKTPFFCLLGSKLISEVTPLLLRNLPGTNT--I |
Parental | TPETAEKLARDLKAVKYVECS |
TPETAEKLA.DLKAV.YVECS | |
Retrocopy | TPETAEKLACDLKAVRYVECS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |