RetrogeneDB ID: | retro_chof_1853 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_403585:436..1007(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000005306 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.58 % |
Parental protein coverage: | 99.48 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPL |
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA.TVMIGGE.YTLGLFDTAGQEDYDRL.P. | |
Retrocopy | MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAGTVMIGGETYTLGLFDTAGQEDYDRLQPV |
Parental | SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPE |
SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPE | |
Retrocopy | SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPE |
Parental | TAEKLARDLKAVKYVECSALTQRGLK-NVFDEAILAALEPPETQPKRKCCI |
TAEKLARDLKA.KYVECSA..Q.GLK.NV..EAILAALEPPE....R.C.. | |
Retrocopy | TAEKLARDLKAIKYVECSAWAQKGLK>NVSNEAILAALEPPEPKESRRCVL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |