RetrogeneDB ID: | retro_chof_1944 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_429770:431..775(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000012403 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000005944 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.83 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSL-IC-NVGAGGP |
MAS.SEL..I..A.ILHDD.VT.TE.KI..LIKA.G.N.E..WP.LFAK.LA...I.SL.IC.NV.AGG. | |
Retrocopy | MASISELTYIHLAFILHDDKVTITEAKISSLIKATGINFEQLWPALFAKILAKSTIRSL>IC>NVRAGGS |
Parental | APAAGAAPAGGPAPSTTAAPAEEKKVEAKKEESEESDDDMGFGLFD |
APA.GAAPAGG.....TAA..EEK.VEAKKEESEESDDDMGFGLFD | |
Retrocopy | APAVGAAPAGGSVSFPTAASTEEKEVEAKKEESEESDDDMGFGLFD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |