Parental gene:

ENSFCAG00000032037

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B3:38125128..38128861(-)


>ENSFCAG00000032037
ATGGCCTCCGTCTCGGAGCTCGCCTGCATCTACTCGGCCCTCATCCTGCACGACGACGAGGTGACGGTCACGGAGGATAA
GATCAACGCCCTCATTAAAGCAGCGGGTGTAAATGTTGAGCCTTTCTGGCCGGGCTTGTTTGCAAAGGCCCTGGCCAACG
TCAACATCGGGAGCCTCATCTGCAATGTAGGAGCTGGTGGACCCGCTCCAGCAGCCGGTGCTGCACCAGCAGGCGGTCCT
GCTCCTTCCACCACTGCTGCCCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCAGAGGAGTCTGATGATGA
CATGGGCTTTGGTCTTTTTGACTAA

Library Parental gene expression (RPM)
SRP017611_liver 111 .70 RPM
SRP017611_kidney 269 .08 RPM
SRP017611_brain 57 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005944 ortholog_one2one 10 retrogenes
Latimeria chalumnae ENSLACG00000012630 ortholog_many2many 1 retrogene
Macropus eugenii ENSMEUG00000015277 possible_ortholog 6 retrogenes
Macropus eugenii ENSMEUG00000015282 ortholog_many2many 2 retrogenes
Monodelphis domestica ENSMODG00000009209 possible_ortholog 1 retrogene
Monodelphis domestica ENSMODG00000009218 ortholog_many2many 4 retrogenes
Oryctolagus cuniculus ENSOCUG00000015087 possible_ortholog 8 retrogenes
Ochotona princeps ENSOPRG00000001163 possible_ortholog 11 retrogenes
Sarcophilus harrisii ENSSHAG00000014818 possible_ortholog 6 retrogenes
Tursiops truncatus ENSTTRG00000013656 ortholog_one2one 20 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_56 66.67 97.37
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2. retro_fcat_92 60.42 82.46
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3. retro_fcat_552 86.25 69.30
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4. retro_fcat_571 63.25 99.12
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5. retro_fcat_597 70.64 94.74
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6. retro_fcat_825 61.84 64.04
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7. retro_fcat_849 72.00 64.04
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8. retro_fcat_908 64.10 66.67
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9. retro_fcat_928 64.91 99.12
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10. retro_fcat_947 71.30 92.11
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11. retro_fcat_1034 77.78 100.00
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12. retro_fcat_1047 78.95 66.67
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13. retro_fcat_1089 65.56 78.95
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14. retro_fcat_1207 73.11 100.00
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15. retro_fcat_1244 73.50 98.25
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16. retro_fcat_1436 71.60 70.18
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17. retro_fcat_1466 63.92 83.33
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18. retro_fcat_1550 66.67 63.16
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19. retro_fcat_1580 60.87 79.82
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20. retro_fcat_1594 77.78 100.00
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21. retro_fcat_1617 66.67 97.37
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22. retro_fcat_1797 76.52 97.37
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23. retro_fcat_1972 85.57 85.09
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Download FASTA sequences of all ENSFCAG00000032037 retrocopies