RetrogeneDB ID: | retro_fcat_552 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | B1:109807064..109807302(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000032037 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.25 % |
Parental protein coverage: | 69.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MASVSELACIYSALILHDDEVT-VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPA |
MASV.ELAC.YSALILH.DEVT.VTEDKINALIKAA.VNVEPFW.GLFAKALANVNI.SL.C.V.AGGPA | |
Retrocopy | MASVWELACFYSALILHNDEVT>VTEDKINALIKAAVVNVEPFWLGLFAKALANVNIRSLTCSVWAGGPA |
Parental | PAAGAAPAGG |
PAAGA.PAGG | |
Retrocopy | PAAGAPPAGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 57 .04 RPM |
SRP017611_kidney | 0 .00 RPM | 269 .08 RPM |
SRP017611_liver | 0 .00 RPM | 111 .70 RPM |