RetrogeneDB ID: | retro_chof_337 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_7607:12552..12885(-) | ||
Located in intron of: | ENSCHOG00000007010 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000005944 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.97 % |
Parental protein coverage: | 99.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | ASVSELACIYSALILHDDEVTVTE-DKINALIKAAGVNVEPFWPGLFA-KALANVNIGSLICNVGAGGPA |
ASVSE....Y.AL.LHD...T....DKI.A.IKAAG..VEPFWPGLFA.K.L.NVN..SLICNVGAGG.A | |
Retrocopy | ASVSEPP*NYLALTLHDNDITTRG<DKIIAFIKAAGISVEPFWPGLFA<KSLTNVNMRSLICNVGAGGVA |
Parental | PAAGAA-PAGGPAPSTTAAPAEEKKVEAKKEESEESDDDMGFGLFD |
P.AGAA.P.GGP.P.TT.APA..KKVEAKKE.SEE.D.D.GFGL.D | |
Retrocopy | PVAGAA<PVGGPVPFTTTAPA-KKKVEAKKEKSEECDGDIGFGLSD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |