Parental gene:

ENSCHOG00000005944

Aliases:None
Description:None
Organism:Sloth (Choloepus hoffmanni)
Coordinates:scaffold_66395:2623..4777(+)


>ENSCHOG00000005944
ATGGCCTCTGTCTCCGAGCTCGCCTGCATCTACTCGGCACTCATACTCCACGACGATGAGGTCACCGTCACGGAGGATAA
GATCAATGCCCTCATTAAAGCAGCTGGTGTAAATGTTGAACCTTTCTGGCCTGGCTTGTTTGCAAAGGCTCTGGCCAATG
TCAACATCGGGAGCCTTATCTGCAATGTAGGGGCTGGTGGACCTGCACCAGCAGCAGGTGCTGCACCAGCGGGAGGTCCT
GCTCCCTCCACCACTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCTGAAGAATCTGATGATGA
CATGGGCTTTGGTCTTTTTGACTAA

Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000032037 ortholog_one2one 23 retrogenes
retro_fcat_1034, retro_fcat_1047, retro_fcat_1089, retro_fcat_1207, retro_fcat_1244, retro_fcat_1436, retro_fcat_1466, retro_fcat_1550, retro_fcat_1580, retro_fcat_1594, retro_fcat_1617, retro_fcat_1797, retro_fcat_1972, retro_fcat_552, retro_fcat_56, retro_fcat_571, retro_fcat_597, retro_fcat_825, retro_fcat_849, retro_fcat_908, retro_fcat_92, retro_fcat_928, retro_fcat_947,
Latimeria chalumnae ENSLACG00000012630 ortholog_many2many 1 retrogene
retro_lcha_7,
Macropus eugenii ENSMEUG00000015277 possible_ortholog 6 retrogenes
retro_meug_1096, retro_meug_1283, retro_meug_1312, retro_meug_1401, retro_meug_1515, retro_meug_793,
Macropus eugenii ENSMEUG00000015282 ortholog_many2many 2 retrogenes
retro_meug_207, retro_meug_45,
Monodelphis domestica ENSMODG00000009209 possible_ortholog 1 retrogene
retro_mdom_1022,
Monodelphis domestica ENSMODG00000009218 ortholog_many2many 4 retrogenes
retro_mdom_1168, retro_mdom_2001, retro_mdom_385, retro_mdom_50,
Oryctolagus cuniculus ENSOCUG00000015087 possible_ortholog 8 retrogenes
retro_ocun_1009, retro_ocun_1464, retro_ocun_1655, retro_ocun_1735, retro_ocun_48, retro_ocun_551, retro_ocun_647, retro_ocun_884,
Ochotona princeps ENSOPRG00000001163 possible_ortholog 11 retrogenes
retro_opri_1010, retro_opri_130, retro_opri_214, retro_opri_245, retro_opri_38, retro_opri_530, retro_opri_645, retro_opri_768, retro_opri_784, retro_opri_96, retro_opri_972,
Sarcophilus harrisii ENSSHAG00000014818 possible_ortholog 6 retrogenes
retro_shar_182, retro_shar_234, retro_shar_449, retro_shar_550, retro_shar_614, retro_shar_742,
Tursiops truncatus ENSTTRG00000013656 ortholog_one2one 20 retrogenes
retro_ttru_1388, retro_ttru_1502, retro_ttru_1645, retro_ttru_1730, retro_ttru_182, retro_ttru_1820, retro_ttru_1826, retro_ttru_227, retro_ttru_266, retro_ttru_28, retro_ttru_389, retro_ttru_553, retro_ttru_626, retro_ttru_666, retro_ttru_679, retro_ttru_687, retro_ttru_711, retro_ttru_755, retro_ttru_768, retro_ttru_803,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_337 68.97 99.12
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2. retro_chof_666 62.62 91.23
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3. retro_chof_928 65.43 70.18
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4. retro_chof_1312 60.00 81.58
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5. retro_chof_1527 56.79 70.18
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6. retro_chof_1753 79.01 71.05
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7. retro_chof_1944 69.83 100.00
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8. retro_chof_2325 79.49 100.00
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9. retro_chof_2461 70.31 55.26
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10. retro_chof_2714 70.31 55.26
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Download FASTA sequences of all ENSCHOG00000005944 retrocopies