RetrogeneDB ID: | retro_dord_330 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_1185:134793..135091(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Rps14 | ||
Ensembl ID: | ENSDORG00000007146 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:98107] |
Percent Identity: | 59. % |
Parental protein coverage: | 64.24 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | GPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAML-AAQDVAQRCK |
G.Q.....N..GVCHIF.SF.D.FVHVT..SGKE.IC..TGGMKV..D.DES.PYAA.L..AQDVA.R.K | |
Retrocopy | GSQTWNPWNIVGVCHIFPSFDDSFVHVTYISGKESICCGTGGMKV*VDGDES*PYAATLDDAQDVALRYK |
Parental | E-LGITALHIKLRATG-GNRTKTPGPGAQS |
..L.ITALH.KL.....G.R.K..GP...S | |
Retrocopy | V>LDITALHNKLWVKEMGSRPKDWGPRPSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |