Parental gene: | RPS14, ENSPTRG00000017418 |
| Aliases: | None |
| Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:151307597..151313121(-) |
>ENSPTRG00000017418
ATGGCACCTCGAAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGACCTCAGGTGGCTGAAGGAGAGAATGT
ATTTGGTGTCTGCCATATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCACTGATCTTTCTGGCAAAGAAACCATCT
GCCGTGTGACTGGTGGGATGAAGGTAAAGGCAGACCGAGATGAATCCTCACCATATGCTGCTATGTTGGCTGCCCAGGAT
GTGGCCCAGAGGTGCAAGGAGCTGGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGAC
CCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGGTATGAAGATCGGGCGGATTGAGGATGTCACCC
CCATCCCCTCTGACAGCACTCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA
ATGGCACCTCGAAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGACCTCAGGTGGCTGAAGGAGAGAATGT
ATTTGGTGTCTGCCATATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCACTGATCTTTCTGGCAAAGAAACCATCT
GCCGTGTGACTGGTGGGATGAAGGTAAAGGCAGACCGAGATGAATCCTCACCATATGCTGCTATGTTGGCTGCCCAGGAT
GTGGCCCAGAGGTGCAAGGAGCTGGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGAC
CCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGGTATGAAGATCGGGCGGATTGAGGATGTCACCC
CCATCCCCTCTGACAGCACTCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 194 .37 RPM |
| SRP007412_cerebellum | 223 .23 RPM |
| SRP007412_heart | 179 .92 RPM |
| SRP007412_kidney | 394 .87 RPM |
| SRP007412_liver | 302 .63 RPM |
| SRP007412_testis | 216 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004644 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008570 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000018094 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020981 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000024408 | possible_ortholog | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000007146 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024593 | ortholog_one2one | 8 retrogenes | |
| Latimeria chalumnae | ENSLACG00000016164 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000031195 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000014907 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002900 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013279 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000002848 | possible_ortholog | 5 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013776 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010366 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011509 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000721 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000015960 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018774 | possible_ortholog | 10 retrogenes | |
| Sorex araneus | ENSSARG00000014249 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_130 | 90.79 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_224 | 84.56 | 87.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1086 | 78.10 | 68.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2030 | 55.40 | 90.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2104 | 75.48 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_2184 | 87.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_2367 | 71.31 | 80.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_2570 | 71.93 | 74.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017418 retrocopies