RetrogeneDB ID: | retro_pcap_443 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_89074:436..836(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSPCAG00000015960 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 87.5 % |
Parental protein coverage: | 88.08 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | PQVAEGENVFGVCHIFAS-FNDTFVHVTDLSGKETICRV-TGGMKVKADRDESSPYAAMLAAQDVAQRCK |
PQVAEGENVFGVCHIFAS.F.DTFVHVTDLSGK.TICRV..GGMKVKADRDESSPYAAMLAAQDVAQRCK | |
Retrocopy | PQVAEGENVFGVCHIFAS>FSDTFVHVTDLSGKKTICRV<AGGMKVKADRDESSPYAAMLAAQDVAQRCK |
Parental | ELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIDDDTPIPSDSTRRK-GGRRGRRL |
ELGI.ALHIKLRATG.NRTKTPG.GAQSAL.ALA.SGMK.GRI.D.T.IPSDSTR.K.GGRRG.RL | |
Retrocopy | ELGIAALHIKLRATGRNRTKTPGLGAQSALGALACSGMKTGRIEDVTCIPSDSTRQK>GGRRGHRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |