RetrogeneDB ID: | retro_pcap_198 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_154854:691..1111(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSPCAG00000015960 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 85.92 % |
Parental protein coverage: | 92.72 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | EQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRV-TGGMKVKADRDESSPYAAMLAAQD |
E.VISLGPQV.E..NVFGVCHIFASF.DTFVHVTDLSGK.TICRV..GGMKVKADRDESSPYAAMLAAQD | |
Retrocopy | EEVISLGPQVPEERNVFGVCHIFASFSDTFVHVTDLSGKKTICRV<AGGMKVKADRDESSPYAAMLAAQD |
Parental | VAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIDDDTPIPSDSTRRK-GGRRGR |
VAQRCKELGI.ALHIKLRATG.NRTKTPG.GAQSAL.ALA.SGMK.GRI.D.T.IPSDSTR.K.GGRRG. | |
Retrocopy | VAQRCKELGIAALHIKLRATGRNRTKTPGLGAQSALGALACSGMKTGRIEDVTCIPSDSTRQK>GGRRGH |
Parental | RL |
RL | |
Retrocopy | RL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |