RetrogeneDB ID: | retro_tsyr_1587 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_49994:6563..6947(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTSYG00000003649 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 82.81 % |
Parental protein coverage: | 99.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MGAVKKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI |
M...KKLVAKG....K.VLKFTLDCTHP.EDGI.DA.NFEQFLQER.KVNGKAGNLGGGV.TIER.KSKI | |
Retrocopy | MAPMKKLVAKGAXXXK*VLKFTLDCTHPIEDGILDATNFEQFLQERLKVNGKAGNLGGGVITIERNKSKI |
Parental | TVTSEVPFSKRYLKYLTKKYLKTNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
TVT.EVPFSKRYLKYLTKKYLK.NNL.DWL.V.ANS.E.Y.LRYFQINQDEEEEEDED | |
Retrocopy | TVTPEVPFSKRYLKYLTKKYLKKNNLHDWLCVAANSQERYKLRYFQINQDEEEEEDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |