RetrogeneDB ID: | retro_amel_1219 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193063.1:766025..766360(-) | ||
Located in intron of: | ENSAMEG00000015895 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSAMEG00000009864 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 75.22 % |
Parental protein coverage: | 85.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYL |
QVLKF.LDCTHPVE.GI.DAANF.QFLQERIK.N.KAGNL.G.VVT.ER.KSKI.VTSEV.FSKR.LKYL | |
Retrocopy | QVLKFALDCTHPVEEGIVDAANFGQFLQERIKMNRKAGNLCGKVVTTERRKSKIMVTSEVGFSKRHLKYL |
Parental | TKKYLKKNN-LRDWLRVVANSKDSYELRYFQINQDEEEEEDED |
.KKYL..NN...DWL.VV.NS.....L.YFQINQD.EEEEDED | |
Retrocopy | IKKYLN*NN<SCDWLSVVGNSTENCRLHYFQINQDKEEEEDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |