RetrogeneDB ID: | retro_tsyr_200 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_5129:53334..53705(+) | ||
Located in intron of: | ENSTSYG00000004321 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTSYG00000003649 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 88. % |
Parental protein coverage: | 96.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGAVKKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI |
M..VKKLVAKGG...KQVLKFT.DCTHPVEDGIM.AANFEQFLQERI.VNGKAGNLGGGVVT.ER.KSKI | |
Retrocopy | MAPVKKLVAKGGXXXKQVLKFTVDCTHPVEDGIMHAANFEQFLQERIQVNGKAGNLGGGVVTVERNKSKI |
Parental | TVTSEVPFSKRYLKYLTKKYLKTNNLRDWLRVVANSKESYELRYFQ-INQDEEEE |
TVTSEVPFSKRY.KYLTKKYLK.NNLRDWL.VVANSKE.YELRYFQ.INQDEEEE | |
Retrocopy | TVTSEVPFSKRYMKYLTKKYLKKNNLRDWLLVVANSKEGYELRYFQ<INQDEEEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |