Parental gene:

RPL22, ENSTSYG00000003649

Aliases:None
Description:ribosomal protein L22 [Source:HGNC Symbol;Acc:10315]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_2502:1124..11155(-)


>ENSTSYG00000003649
ATGGGTGCCGTAAAAAAGCTTGTGGCGAAGGGGGGCAAAAAAAAGAAGCAGGTTCTGAAGTTCACTCTTGATTGCACCCA
CCCTGTAGAAGATGGAATCATGGATGCAGCCAATTTTGAGCAGTTTTTGCAAGAGAGGATCAAAGTGAACGGAAAAGCTG
GGAATCTCGGTGGAGGAGTTGTGACTATTGAAAGGAGCAAGAGCAAGATCACTGTGACTTCCGAGGTGCCTTTTTCCAAA
AGGTATTTGAAATATCTCACCAAAAAATATTTGAAGACGAATAATCTACGTGATTGGTTGCGCGTAGTTGCTAACAGCAA
AGAGAGTTACGAGTTGCGTTACTTCCAAATTAACCAGGATGAAGAAGAGGAGGAAGATGAGGATGAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009864 possible_ortholog 7 retrogenes
retro_amel_1219, retro_amel_1247, retro_amel_1775, retro_amel_1793, retro_amel_369, retro_amel_830, retro_amel_870,
Bos taurus ENSBTAG00000014423 possible_ortholog 4 retrogenes
retro_btau_1491, retro_btau_566, retro_btau_694, retro_btau_892,
Cavia porcellus ENSCPOG00000020139 ortholog_one2one 2 retrogenes
retro_cpor_825, retro_cpor_837,
Gorilla gorilla ENSGGOG00000027739 ortholog_one2many 10 retrogenes
retro_ggor_1111, retro_ggor_1652, retro_ggor_1655, retro_ggor_1708, retro_ggor_1757, retro_ggor_2268, retro_ggor_2567, retro_ggor_37, retro_ggor_531, retro_ggor_613,
Macaca mulatta ENSMMUG00000018347 ortholog_one2many 12 retrogenes
retro_mmul_1004, retro_mmul_1044, retro_mmul_1047, retro_mmul_1512, retro_mmul_2209, retro_mmul_2264, retro_mmul_2467, retro_mmul_2601, retro_mmul_271, retro_mmul_445, retro_mmul_469, retro_mmul_80,
Mustela putorius furo ENSMPUG00000007087 possible_ortholog 6 retrogenes
retro_mputfur_1074, retro_mputfur_1277, retro_mputfur_134, retro_mputfur_1433, retro_mputfur_578, retro_mputfur_873,
Pongo abelii ENSPPYG00000001951 possible_ortholog 11 retrogenes
retro_pabe_1196, retro_pabe_1213, retro_pabe_1435, retro_pabe_166, retro_pabe_248, retro_pabe_3114, retro_pabe_349, retro_pabe_3782, retro_pabe_3817, retro_pabe_590, retro_pabe_966,
Sus scrofa ENSSSCG00000003367 possible_ortholog 4 retrogenes
retro_sscr_257, retro_sscr_276, retro_sscr_497, retro_sscr_509,
Ictidomys tridecemlineatus ENSSTOG00000002832 ortholog_one2one 4 retrogenes
retro_itri_1250, retro_itri_1326, retro_itri_1543, retro_itri_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_200 88.00 96.12
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2. retro_tsyr_219 81.51 90.70
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3. retro_tsyr_242 69.57 70.54
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4. retro_tsyr_337 74.77 82.17
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5. retro_tsyr_377 92.98 88.37
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6. retro_tsyr_392 68.07 92.25
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7. retro_tsyr_504 92.94 65.89
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8. retro_tsyr_688 50.93 82.95
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9. retro_tsyr_788 92.80 96.90
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10. retro_tsyr_828 92.80 96.90
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11. retro_tsyr_881 93.60 96.90
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12. retro_tsyr_969 93.86 88.37
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13. retro_tsyr_972 84.35 87.60
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14. retro_tsyr_973 93.86 88.37
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15. retro_tsyr_983 92.80 96.90
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16. retro_tsyr_1043 92.94 65.89
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17. retro_tsyr_1086 93.60 96.90
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18. retro_tsyr_1140 92.98 88.37
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19. retro_tsyr_1163 92.98 88.37
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20. retro_tsyr_1197 96.55 89.92
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21. retro_tsyr_1259 92.80 96.90
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22. retro_tsyr_1304 93.60 96.90
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23. retro_tsyr_1338 74.77 82.17
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24. retro_tsyr_1350 93.86 88.37
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25. retro_tsyr_1524 88.39 86.05
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26. retro_tsyr_1587 82.81 99.22
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27. retro_tsyr_1788 93.86 88.37
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28. retro_tsyr_1966 61.86 90.70
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29. retro_tsyr_1978 74.47 72.09
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30. retro_tsyr_2075 93.86 88.37
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31. retro_tsyr_2101 92.80 96.90
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32. retro_tsyr_2114 78.91 98.45
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Download FASTA sequences of all ENSTSYG00000003649 retrocopies